as descriped in
Minimalistic software for precursor ion quantitation
Download XiQ 32Bit (v0.2)
Download XiQ 64Bit (v0.2)
Download XiQ source (v0.2)
XiQ requires the Thermo MSFileReader library for accessing raw-files. link
XiQ.exe csv-file rawfile1 [rawfile2] [rawfile3] ...
This will read the csv-file and read out intensities from the the given rawfiles as defined by the csv file
XiQ.exe csv-file raw-directory
This will read the csv-file and read out intensities from rawfiles within the given directory as defined by the csv file
The csv has to contain the following columns (in that order):
It can be followed by any number of columns.
An example would be:
run_name,scan_number,precursor_mz,precursor_charge,label,label count,label status,expect shift,time window,id rawfile1,10579,403.7445,2,4.025106984,1,1,1,4, rawfile1,11220,406.7716,2,4.025106984,1,0,1,4, rawfile2,13517,407.2642,2,4.025106984,1,0,1,4, rawfile3,11130,408.7841,2,4.025106984,1,1,1,4,